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GCAT glycine C-acetyltransferase [ Vicugna pacos (alpaca) ]

Gene ID: 102545212, updated on 10-Mar-2024

Summary

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Gene symbol
GCAT
Gene description
glycine C-acetyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See GCAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_021969565.1 (1511817..1518112)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882768.1 (3548863..3555169)

NW_021969565.1Genomic Context describing neighboring genes Neighboring gene TRIO and F-actin-binding protein Neighboring gene histone H1.0 Neighboring gene galanin receptor 3 Neighboring gene ankyrin repeat domain 54

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine C-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021969565.1 Reference VicPac3.1 Primary Assembly

    Range
    1511817..1518112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006207066.3 → XP_006207128.1  2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9I9K1
    Conserved Domains (1) summary
    cl18945
    Location:30 → 421
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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