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NSUN2 NOP2/Sun RNA methyltransferase 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102541845, updated on 10-Mar-2024

Summary

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Gene symbol
NSUN2
Gene description
NOP2/Sun RNA methyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 3 Unlocalized Scaffold NW_021964160.1 (61196732..61225622)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882712.1 (4530640..4556255, complement)

NW_021964160.1Genomic Context describing neighboring genes Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene uncharacterized LOC116280087 Neighboring gene uncharacterized LOC116280088

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA (cytidine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA cytosine C(5)-methyltransferase NSUN2
Names
NOP2/Sun RNA methyltransferase family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964160.1 Reference VicPac3.1 Primary Assembly

    Range
    61196732..61225622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031673821.1 → XP_031529681.1  RNA cytosine C(5)-methyltransferase NSUN2

    UniProtKB/TrEMBL
    A0A6J3AAC1
    Conserved Domains (1) summary
    COG0144
    Location:4 → 412
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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