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TAT tyrosine aminotransferase [ Vicugna pacos (alpaca) ]

Gene ID: 102541428, updated on 10-Mar-2024

Summary

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Gene symbol
TAT
Gene description
tyrosine aminotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 9 Unlocalized Scaffold NW_021964171.1 (20835543..20845388)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882719.1 (1095191..1104973, complement)

NW_021964171.1Genomic Context describing neighboring genes Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 Neighboring gene MARVEL domain containing 3 Neighboring gene nascent polypeptide-associated complex subunit alpha-like Neighboring gene carbohydrate sulfotransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-tyrosine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid family catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964171.1 Reference VicPac3.1 Primary Assembly

    Range
    20835543..20845388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031680784.1 → XP_031536644.1  tyrosine aminotransferase isoform X2

    UniProtKB/TrEMBL
    A0A6J3AS26
    Conserved Domains (2) summary
    TIGR01264
    Location:34 → 368
    tyr_amTase_E; tyrosine aminotransferase, eukaryotic
    pfam07706
    Location:1 → 33
    TAT_ubiq; Aminotransferase ubiquitination site

  2. XM_006199702.3 → XP_006199764.2  tyrosine aminotransferase isoform X1

    UniProtKB/TrEMBL
    A0A6I9HYL7
    Conserved Domains (2) summary
    TIGR01264
    Location:34 → 435
    tyr_amTase_E; tyrosine aminotransferase, eukaryotic
    pfam07706
    Location:1 → 33
    TAT_ubiq; Aminotransferase ubiquitination site
Nucleotide Protein
Heading Accession and Version

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