U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CATSPER2 cation channel sperm associated 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102538315, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CATSPER2
Gene description
cation channel sperm associated 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_021988660.1 (14169352..14181833)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882731.1 (8783108..8795925, complement)

NW_021988660.1Genomic Context describing neighboring genes Neighboring gene elongation factor for RNA polymerase II 3 Neighboring gene protein disulfide isomerase family A member 3 Neighboring gene stereocilin Neighboring gene creatine kinase, mitochondrial 1A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm capacitation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cation channel sperm-associated protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021988660.1 Reference VicPac3.1 Primary Assembly

    Range
    14169352..14181833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031672848.1 → XP_031528708.1  cation channel sperm-associated protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6J3A512
    Conserved Domains (1) summary
    pfam00520
    Location:108 → 350
    Ion_trans; Ion transport protein

  2. XM_006201719.3 → XP_006201781.1  cation channel sperm-associated protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I9I3V0
    Conserved Domains (1) summary
    pfam00520
    Location:108 → 350
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.