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EXOSC6 exosome component 6 [ Vicugna pacos (alpaca) ]

Gene ID: 102537774, updated on 11-Apr-2024

Summary

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Gene symbol
EXOSC6
Gene description
exosome component 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 9 Unlocalized Scaffold NW_021964171.1 (21899355..21900833)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882719.1 (38293..39732, complement)

NW_021964171.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX19B Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene C-type lectin domain family 18 member C Neighboring gene uncharacterized LOC116281929 Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex component MTR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964171.1 Reference VicPac3.1 Primary Assembly

    Range
    21899355..21900833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031680819.1 → XP_031536679.1  exosome complex component MTR3

    UniProtKB/TrEMBL
    A0A6J3AS61
    Conserved Domains (1) summary
    cd11371
    Location:36 → 260
    RNase_PH_MTR3; MTR3 subunit of eukaryotic exosome
Nucleotide Protein
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