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ASB3 ankyrin repeat and SOCS box containing 3 [ Vicugna pacos (alpaca) ]

Gene ID: 102537325, updated on 10-Mar-2024

Summary

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Gene symbol
ASB3
Gene description
ankyrin repeat and SOCS box containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_022038954.1 (4192283..4273812, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882827.1 (4181544..4255589, complement)

NW_022038954.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene ChaC glutathione specific gamma-glutamylcyclotransferase 2 Neighboring gene endoplasmic reticulum lectin 1 Neighboring gene G protein-coupled receptor 75

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_022038954.1 Reference VicPac3.1 Primary Assembly

    Range
    4192283..4273812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031675624.1 → XP_031531484.1  ankyrin repeat and SOCS box protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J3ACK8
    Conserved Domains (4) summary
    PHA02876
    Location:83 → 411
    PHA02876; ankyrin repeat protein; Provisional
    cd03722
    Location:457 → 507
    SOCS_ASB3; SOCS (suppressors of cytokine signaling) box of ASB3-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. ABS3 has been shown to be negative regulator of TNF-R2-mediated cellular responses to TNF-alpha ...
    sd00045
    Location:146 → 176
    ANK; ANK repeat [structural motif]
    cl39094
    Location:22 → 237
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_031675625.1 → XP_031531485.1  ankyrin repeat and SOCS box protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J3AAY0
    Conserved Domains (4) summary
    cd03722
    Location:379 → 429
    SOCS_ASB3; SOCS (suppressors of cytokine signaling) box of ASB3-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. ABS3 has been shown to be negative regulator of TNF-R2-mediated cellular responses to TNF-alpha ...
    sd00045
    Location:153 → 183
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:223 → 316
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:29 → 244
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_015245265.2 → XP_015100751.1  ankyrin repeat and SOCS box protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J0ATQ3
    Conserved Domains (4) summary
    PHA02876
    Location:90 → 418
    PHA02876; ankyrin repeat protein; Provisional
    cd03722
    Location:464 → 514
    SOCS_ASB3; SOCS (suppressors of cytokine signaling) box of ASB3-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. ABS3 has been shown to be negative regulator of TNF-R2-mediated cellular responses to TNF-alpha ...
    sd00045
    Location:153 → 183
    ANK; ANK repeat [structural motif]
    cl39094
    Location:29 → 244
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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