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FOXO6 forkhead box O6 [ Vicugna pacos (alpaca) ]

Gene ID: 102534050, updated on 10-Mar-2024

Summary

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Gene symbol
FOXO6
Gene description
forkhead box O6
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See FOXO6 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 13 Unlocalized Scaffold NW_021964181.1 (28068405..28087478)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882929.1 (1386720..1405789, complement)

NW_021964181.1Genomic Context describing neighboring genes Neighboring gene CTP synthase 1 Neighboring gene schlafen like 1 Neighboring gene Scm polycomb group protein homolog 1 Neighboring gene endothelin 2 Neighboring gene HIVEP zinc finger 3 Neighboring gene transfer RNA threonine (anticodon GGU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein O6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964181.1 Reference VicPac3.1 Primary Assembly

    Range
    28068405..28087478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006215878.3 → XP_006215940.3  forkhead box protein O6

    UniProtKB/TrEMBL
    A0A6I9IMJ6
    Conserved Domains (1) summary
    cd00059
    Location:5 → 85
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
Nucleotide Protein
Heading Accession and Version

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