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SENP2 SUMO specific peptidase 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102533889, updated on 10-Mar-2024

Summary

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Gene symbol
SENP2
Gene description
SUMO specific peptidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 1 Unlocalized Scaffold NW_021964156.1 (9202135..9231238)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882727.1 (9989720..10018817, complement)

NW_021964156.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 41A Neighboring gene lipase H Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene insulin like growth factor 2 mRNA binding protein 2 Neighboring gene transformer 2 beta homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deSUMOylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein desumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sentrin-specific protease 2
Names
SUMO1/sentrin/SMT3 specific peptidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964156.1 Reference VicPac3.1 Primary Assembly

    Range
    9202135..9231238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015236623.2 → XP_015092109.1  sentrin-specific protease 2 isoform X1

    UniProtKB/TrEMBL
    A0A6J0AF88
    Conserved Domains (1) summary
    COG5160
    Location:388 → 593
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

  2. XM_006201006.3 → XP_006201068.1  sentrin-specific protease 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I9I1E2
    Conserved Domains (1) summary
    COG5160
    Location:384 → 589
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

  3. XM_031682515.1 → XP_031538375.1  sentrin-specific protease 2 isoform X3

    UniProtKB/TrEMBL
    A0A6J3AUV5
    Conserved Domains (1) summary
    COG5160
    Location:308 → 513
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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