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FANCA FA complementation group A [ Vicugna pacos (alpaca) ]

Gene ID: 102530554, updated on 10-Mar-2024

Summary

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Gene symbol
FANCA
Gene description
FA complementation group A
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_021969788.1 (197542..244420)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882855.1 (197737..244547)

NW_021969788.1Genomic Context describing neighboring genes Neighboring gene transcription factor 25 Neighboring gene spire type actin nucleation factor 2 Neighboring gene zinc finger protein 276 Neighboring gene VPS9 domain containing 1 Neighboring gene spermatogenesis associated 2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of regulatory T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group A protein
Names
Fanconi anemia complementation group A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021969788.1 Reference VicPac3.1 Primary Assembly

    Range
    197542..244420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031671867.1 → XP_031527727.1  Fanconi anemia group A protein isoform X1

    UniProtKB/TrEMBL
    A0A6J3A363
    Conserved Domains (2) summary
    pfam03511
    Location:1108 → 1157
    Fanconi_A; Fanconi anaemia group A protein
    pfam15865
    Location:13 → 364
    Fanconi_A_N; Fanconi anaemia group A protein N-terminus

  2. XM_031671866.1 → XP_031527726.1  Fanconi anemia group A protein isoform X1

    UniProtKB/TrEMBL
    A0A6J3A363
    Conserved Domains (2) summary
    pfam03511
    Location:1108 → 1157
    Fanconi_A; Fanconi anaemia group A protein
    pfam15865
    Location:13 → 364
    Fanconi_A_N; Fanconi anaemia group A protein N-terminus

  3. XM_031671868.1 → XP_031527728.1  Fanconi anemia group A protein isoform X2

    UniProtKB/TrEMBL
    A0A6J3A292
    Conserved Domains (2) summary
    pfam03511
    Location:1107 → 1156
    Fanconi_A; Fanconi anaemia group A protein
    pfam15865
    Location:13 → 363
    Fanconi_A_N; Fanconi anaemia group A protein N-terminus

  4. XM_031671869.1 → XP_031527729.1  Fanconi anemia group A protein isoform X3

    UniProtKB/TrEMBL
    A0A6J3A0N5
    Conserved Domains (2) summary
    pfam03511
    Location:994 → 1043
    Fanconi_A; Fanconi anaemia group A protein
    pfam15865
    Location:1 → 250
    Fanconi_A_N; Fanconi anaemia group A protein N-terminus

  5. XM_031671870.1 → XP_031527730.1  Fanconi anemia group A protein isoform X3

    UniProtKB/TrEMBL
    A0A6J3A0N5
    Conserved Domains (2) summary
    pfam03511
    Location:994 → 1043
    Fanconi_A; Fanconi anaemia group A protein
    pfam15865
    Location:1 → 250
    Fanconi_A_N; Fanconi anaemia group A protein N-terminus
Nucleotide Protein
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