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SLC22A5 solute carrier family 22 member 5 [ Vicugna pacos (alpaca) ]

Gene ID: 102527088, updated on 10-Mar-2024

Summary

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Gene symbol
SLC22A5
Gene description
solute carrier family 22 member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_021990880.1 (5383914..5407642, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882861.1 (3410503..3433001, complement)

NW_021990880.1Genomic Context describing neighboring genes Neighboring gene RAD50 double strand break repair protein Neighboring gene interleukin 5 Neighboring gene interferon regulatory factor 1 Neighboring gene solute carrier family 22 member 4 Neighboring gene PDZ and LIM domain 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 22 member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021990880.1 Reference VicPac3.1 Primary Assembly

    Range
    5383914..5407642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031673086.1 → XP_031528946.1  solute carrier family 22 member 5 isoform X2

    UniProtKB/TrEMBL
    A0A6J3A838
    Conserved Domains (1) summary
    TIGR00898
    Location:12 → 490
    2A0119; cation transport protein

  2. XM_015246574.2 → XP_015102060.2  solute carrier family 22 member 5 isoform X1

    UniProtKB/TrEMBL
    A0A6J0AX87
    Conserved Domains (1) summary
    TIGR00898
    Location:12 → 520
    2A0119; cation transport protein

  3. XM_031673088.1 → XP_031528948.1  solute carrier family 22 member 5 isoform X3

    UniProtKB/TrEMBL
    A0A6J3A5P9
    Conserved Domains (1) summary
    TIGR00898
    Location:12 → 432
    2A0119; cation transport protein
Nucleotide Protein
Heading Accession and Version

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