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APBB3 amyloid beta precursor protein binding family B member 3 [ Vicugna pacos (alpaca) ]

Gene ID: 102524788, updated on 10-Mar-2024

Summary

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Gene symbol
APBB3
Gene description
amyloid beta precursor protein binding family B member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 3 Unlocalized Scaffold NW_021964158.1 (8751981..8757849)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882746.1 (8729034..8734903)

NW_021964158.1Genomic Context describing neighboring genes Neighboring gene SLC35A4 upstream open reading frame protein Neighboring gene solute carrier family 35 member A4 Neighboring gene ankyrin repeat and KH domain-containing protein 1 Neighboring gene steroid receptor RNA activator 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family B member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964158.1 Reference VicPac3.1 Primary Assembly

    Range
    8751981..8757849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031672346.1 → XP_031528206.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X4

    UniProtKB/TrEMBL
    A0A6J3A5U2
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:290 → 420
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 261
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  2. XM_006204553.3 → XP_006204615.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X5

    UniProtKB/TrEMBL
    A0A6I9I965
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:283 → 413
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 254
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  3. XM_006204554.3 → XP_006204616.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X6

    UniProtKB/TrEMBL
    A0A6I9I617
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:281 → 411
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 252
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  4. XM_031672334.1 → XP_031528194.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J3A3B8
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:315 → 445
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 261
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  5. XM_015239494.2 → XP_015094980.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0AK13
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:308 → 438
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 254
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  6. XM_031672364.1 → XP_031528224.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X7

    UniProtKB/TrEMBL
    A0A6J3A3E8
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:285 → 392
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 261
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  7. XM_015239495.2 → XP_015094981.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0AL96
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:306 → 436
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 252
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
Nucleotide Protein
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