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MID1 midline 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102518817, updated on 10-Mar-2024

Summary

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Gene symbol
MID1
Gene description
midline 1
Locus tag
CB1_002210005
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) X NC_045732.1 (14290665..14429315, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006212381.1 (455210..610819)

Chromosome X - NC_045732.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon GGU) Neighboring gene transfer RNA threonine (anticodon CGU) Neighboring gene chloride voltage-gated channel 4 Neighboring gene uncharacterized LOC116662203 Neighboring gene uncharacterized LOC106730816

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Midline-1
Names
midline 1 (Opitz/BBB syndrome)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045732.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    14290665..14429315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032475641.1 → XP_032331532.1  E3 ubiquitin-protein ligase Midline-1

    UniProtKB/TrEMBL
    A0A8B8SQ37
    Conserved Domains (4) summary
    smart00502
    Location:182 → 307
    BBC; B-Box C-terminal domain
    cd12892
    Location:385 → 561
    SPRY_PRY_TRIM18; PRY/SPRY domain of TRIM18/MID1, also known as FXY or RNF59
    cd19836
    Location:115 → 164
    Bbox1_MID1_C-I; B-box-type 1 zinc finger found in midline-1 (MID1) and similar proteins
    cl17238
    Location:8 → 61
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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