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CPNE6 copine 6 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102517310, updated on 10-Mar-2024

Summary

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Gene symbol
CPNE6
Gene description
copine 6
See related
EnsemblRapid:ENSCFEG00005014050
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 6 NC_045701.1 (32466811..32474073)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210243.1 (368689..375764)

Chromosome 6 - NC_045701.1Genomic Context describing neighboring genes Neighboring gene dehydrogenase/reductase SDR family member 4-like Neighboring gene uncharacterized LOC116664192 Neighboring gene capping protein regulator and myosin 1 linker 3 Neighboring gene neural retina leucine zipper Neighboring gene phosphoenolpyruvate carboxykinase 2, mitochondrial Neighboring gene DDB1 and CUL4 associated factor 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
copine-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045701.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    32466811..32474073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006172802.3 → XP_006172864.2  copine-6 isoform X2

    UniProtKB/TrEMBL
    A0A8B6Y4Q4
    Related
    ENSCFEP00005023280.1, ENSCFET00005025903.1
    Conserved Domains (3) summary
    cd04047
    Location:152 → 266
    C2B_Copine; C2 domain second repeat in Copine
    cd04048
    Location:20 → 137
    C2A_Copine; C2 domain first repeat in Copine
    pfam07002
    Location:325 → 541
    Copine

  2. XM_032481744.1 → XP_032337635.1  copine-6 isoform X1

    UniProtKB/TrEMBL
    A0A8B8T5T2
    Conserved Domains (3) summary
    cd04047
    Location:152 → 266
    C2B_Copine; C2 domain second repeat in Copine
    cd04048
    Location:20 → 137
    C2A_Copine; C2 domain first repeat in Copine
    pfam07002
    Location:325 → 569
    Copine

  3. XM_032481746.1 → XP_032337637.1  copine-6 isoform X3

    UniProtKB/TrEMBL
    A0A8B8T6I0
    Conserved Domains (3) summary
    cd04047
    Location:152 → 266
    C2B_Copine; C2 domain second repeat in Copine
    cd04048
    Location:20 → 137
    C2A_Copine; C2 domain first repeat in Copine
    cl00057
    Location:272 → 389
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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