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PKP3 plakophilin 3 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102510647, updated on 10-Mar-2024

Summary

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Gene symbol
PKP3
Gene description
plakophilin 3
See related
EnsemblRapid:ENSCFEG00005014244
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 10 NC_045705.1 (72124074..72133216, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210323.1 (1915..7450)

Chromosome 10 - NC_045705.1Genomic Context describing neighboring genes Neighboring gene anoctamin 9 Neighboring gene single Ig and TIR domain containing Neighboring gene phosphatidylserine synthase 2-like Neighboring gene ribonuclease inhibitor-like Neighboring gene uncharacterized LOC116666583

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plakophilin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045705.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    72124074..72133216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032490397.1 → XP_032346288.1  plakophilin-3 isoform X2

    UniProtKB/TrEMBL
    A0A8B8TWI5
    Related
    ENSCFEP00005023654.1, ENSCFET00005026329.1
    Conserved Domains (3) summary
    smart00185
    Location:304 → 344
    ARM; Armadillo/beta-catenin-like repeats
    COG5064
    Location:274 → 439
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:275 → 300
    ARM; armadillo repeat [structural motif]

  2. XM_032490396.1 → XP_032346287.1  plakophilin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8B8TVF4
    Conserved Domains (3) summary
    smart00185
    Location:368 → 408
    ARM; Armadillo/beta-catenin-like repeats
    COG5064
    Location:338 → 503
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:339 → 364
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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