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TSPOAP1 TSPO associated protein 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102510369, updated on 10-Mar-2024

Summary

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Gene symbol
TSPOAP1
Gene description
TSPO associated protein 1
See related
EnsemblRapid:ENSCFEG00005018014
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
33
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 16 NC_045711.1 (5931296..5957164)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210728.1 (2026013..2051086, complement)

Chromosome 16 - NC_045711.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 43 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene uncharacterized LOC116669272 Neighboring gene myeloperoxidase Neighboring gene lactoperoxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peripheral-type benzodiazepine receptor-associated protein 1
Names
benzodiazapine receptor (peripheral) associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045711.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    5931296..5957164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032498417.1 → XP_032354308.1  peripheral-type benzodiazepine receptor-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B8UIU3
    Conserved Domains (6) summary
    cd12014
    Location:654 → 714
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03307
    Location:1088 → 1485
    PHA03307; transcriptional regulator ICP4; Provisional
    COG1196
    Location:159 → 523
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:882 → 944
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam08614
    Location:124 → 184
    ATG16; Autophagy protein 16 (ATG16)
    NF033761
    Location:946 → 1202
    gliding_GltJ; adventurous gliding motility protein GltJ

  2. XM_032498414.1 → XP_032354305.1  peripheral-type benzodiazepine receptor-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8UJK9
    Related
    ENSCFEP00005031008.1, ENSCFET00005034382.1
    Conserved Domains (8) summary
    cd12012
    Location:1632 → 1693
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1772 → 1831
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:654 → 714
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03247
    Location:916 → 1237
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1088 → 1485
    PHA03307; transcriptional regulator ICP4; Provisional
    COG1196
    Location:159 → 523
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:882 → 944
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam08614
    Location:124 → 184
    ATG16; Autophagy protein 16 (ATG16)

  3. XM_032498415.1 → XP_032354306.1  peripheral-type benzodiazepine receptor-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8UIF5
    Conserved Domains (8) summary
    cd12012
    Location:1632 → 1693
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1772 → 1831
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:654 → 714
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03247
    Location:916 → 1237
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1088 → 1485
    PHA03307; transcriptional regulator ICP4; Provisional
    COG1196
    Location:159 → 523
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:882 → 944
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam08614
    Location:124 → 184
    ATG16; Autophagy protein 16 (ATG16)

  4. XM_032498416.1 → XP_032354307.1  peripheral-type benzodiazepine receptor-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8UIV9
    Related
    ENSCFEP00005031040.1, ENSCFET00005034416.1
    Conserved Domains (7) summary
    cd12012
    Location:1572 → 1633
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1712 → 1771
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:594 → 654
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03247
    Location:856 → 1177
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1028 → 1425
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00063
    Location:822 → 884
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:127 → 472
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  5. XM_032498418.1 → XP_032354309.1  peripheral-type benzodiazepine receptor-associated protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B8UIC3
    Conserved Domains (7) summary
    cd12012
    Location:1195 → 1256
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1335 → 1394
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:217 → 277
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03247
    Location:479 → 744
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:651 → 1048
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00063
    Location:445 → 507
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:3 → 85
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
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