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BRD1 bromodomain containing 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102503483, updated on 10-Mar-2024

Summary

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Gene symbol
BRD1
Gene description
bromodomain containing 1
Locus tag
CB1_000480005
See related
EnsemblRapid:ENSCFEG00005012319
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See BRD1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 12 NC_045707.1 (12030421..12063690, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210656.1 (190473..222643, complement)

Chromosome 12 - NC_045707.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106729080 Neighboring gene uncharacterized LOC116667561 Neighboring gene zinc finger BED-type containing 4 Neighboring gene ALG12 alpha-1,6-mannosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MOZ/MORF histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045707.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    12030421..12063690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032492522.1 → XP_032348413.1  bromodomain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B8U2G8, S9X1A1
    Conserved Domains (4) summary
    cd05839
    Location:871 → 986
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  2. XM_032492520.1 → XP_032348411.1  bromodomain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8U1F7, S9X1A1
    Conserved Domains (4) summary
    cd05839
    Location:906 → 1021
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  3. XM_032492521.1 → XP_032348412.1  bromodomain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B8U1W0, S9X1A1
    Related
    ENSCFEP00005020549.1, ENSCFET00005022887.1
    Conserved Domains (4) summary
    cd05839
    Location:890 → 1005
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  4. XM_032492519.1 → XP_032348410.1  bromodomain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8U2P6, S9X1A1
    Related
    ENSCFEP00005020496.1, ENSCFET00005022829.1
    Conserved Domains (4) summary
    cd05839
    Location:925 → 1040
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  5. XM_032492516.1 → XP_032348407.1  bromodomain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8U1V5
    Conserved Domains (4) summary
    cd05839
    Location:1055 → 1170
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  6. XM_032492517.1 → XP_032348408.1  bromodomain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8U1V5
    Conserved Domains (4) summary
    cd05839
    Location:1055 → 1170
    BR140_related; The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2. BR140 is the only family to contain the PWWP domain at the C terminus, with PHD and bromo domains in the N-terminal region. In myeloid leukemias, ...
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

  7. XM_032492523.1 → XP_032348414.1  bromodomain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8B8U1F5
    Related
    ENSCFEP00005020629.1, ENSCFET00005022974.1
    Conserved Domains (3) summary
    cd05512
    Location:565 → 662
    Bromo_brd1_like; Bromodomain; brd1_like subfamily. BRD1 is a mammalian gene which encodes for a nuclear protein assumed to be a transcriptional regulator. BRD1 has been implicated with brain development and susceptibility to schizophrenia and bipolar affective disorder. ...
    COG5141
    Location:138 → 575
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    pfam10513
    Location:46 → 194
    EPL1; Enhancer of polycomb-like

RNA

  1. XR_004324421.1 RNA Sequence

    Related
    ENSCFET00005022773.1

  2. XR_004324422.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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