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TMOD1 tropomodulin 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102502611, updated on 10-Mar-2024

Summary

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Gene symbol
TMOD1
Gene description
tropomodulin 1
Locus tag
TREES_T100017573
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159568.1 (1147250..1214205, complement)

NW_006159568.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene thiosulfate sulfurtransferase like domain containing 2 Neighboring gene tudor domain containing 7 Neighboring gene coiled-coil domain containing 180 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159568 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tropomyosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pointed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in myofibril IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in striated muscle thin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tropomodulin-1
Names
Tropomodulin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159568.1 Reference TupChi_1.0

    Range
    1147250..1214205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006143714.2 → XP_006143776.1  tropomodulin-1 isoform X2

    UniProtKB/TrEMBL
    L9L446
    Conserved Domains (2) summary
    cd00116
    Location:195 → 289
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam03250
    Location:3 → 143
    Tropomodulin; Tropomodulin

  2. XM_027770028.1 → XP_027625829.1  tropomodulin-1 isoform X1

Nucleotide Protein
Heading Accession and Version

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