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AKAP9 A-kinase anchoring protein 9 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102495622, updated on 10-Mar-2024

Summary

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Gene symbol
AKAP9
Gene description
A-kinase anchoring protein 9
Locus tag
TREES_T100019550
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
54
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159969.1 (1875615..2046139, complement)

NW_006159969.1Genomic Context describing neighboring genes Neighboring gene DNA repair protein XRCC4-like Neighboring gene leucine rich repeats and death domain containing 1 Neighboring gene lanosterol 14-alpha demethylase Neighboring gene U7 small nuclear RNA Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene peptidylprolyl isomerase domain and WD repeat-containing protein 1 pseudogene Neighboring gene mitochondrial transcription termination factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159969 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase A regulatory subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maintenance of centrosome location IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of potassium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ventricular cardiac muscle cell membrane repolarization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A-kinase anchor protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159969.1 Reference TupChi_1.0

    Range
    1875615..2046139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014590551.2 → XP_014446037.1  A-kinase anchor protein 9 isoform X1

    UniProtKB/TrEMBL
    L9K2R9
    Conserved Domains (3) summary
    COG1196
    Location:276 → 997
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1905 → 2560
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam10495
    Location:3710 → 3791
    PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

  2. XM_014590555.1 → XP_014446041.1  A-kinase anchor protein 9 isoform X6

    UniProtKB/TrEMBL
    L9K2R9
    Conserved Domains (4) summary
    COG1196
    Location:258 → 979
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1887 → 2529
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:1395 → 2239
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam10495
    Location:3679 → 3760
    PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

  3. XM_014590553.1 → XP_014446039.1  A-kinase anchor protein 9 isoform X3

    UniProtKB/TrEMBL
    L9K2R9
    Conserved Domains (3) summary
    COG1196
    Location:258 → 979
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1887 → 2542
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam10495
    Location:3692 → 3773
    PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

  4. XM_014590554.1 → XP_014446040.1  A-kinase anchor protein 9 isoform X4

    UniProtKB/TrEMBL
    L9K2R9
    Conserved Domains (2) summary
    COG1196
    Location:276 → 997
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam10495
    Location:3663 → 3744
    PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

  5. XM_006155547.2 → XP_006155609.1  A-kinase anchor protein 9 isoform X2

    UniProtKB/TrEMBL
    L9K2R9
    Conserved Domains (4) summary
    COG1196
    Location:276 → 997
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1905 → 2547
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam02463
    Location:1413 → 2257
    SMC_N; RecF/RecN/SMC N terminal domain
    pfam10495
    Location:3697 → 3778
    PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

  6. XM_027774610.1 → XP_027630411.1  A-kinase anchor protein 9 isoform X5

    UniProtKB/TrEMBL
    L9K2R9
Nucleotide Protein
Heading Accession and Version

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