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MACF1 microtubule actin crosslinking factor 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102480909, updated on 10-Mar-2024

Summary

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Gene symbol
MACF1
Gene description
microtubule actin crosslinking factor 1
Locus tag
TREES_T100000953
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See MACF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
101
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160122.1 (2933273..3212069)

NW_006160122.1Genomic Context describing neighboring genes Neighboring gene akirin 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit S5 Neighboring gene uncharacterized LOC114009689 Neighboring gene uncharacterized LOC106735994 Neighboring gene small nucleolar RNA SNORA55 Neighboring gene poly(A) binding protein cytoplasmic 4 Neighboring gene hes related family bHLH transcription factor with YRPW motif like Neighboring gene 5'-nucleotidase, cytosolic IA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160122 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of focal adhesion assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-actin cross-linking factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160122.1 Reference TupChi_1.0

    Range
    2933273..3212069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027775768.1 → XP_027631569.1  microtubule-actin cross-linking factor 1 isoform X1

    UniProtKB/TrEMBL
    L9JCY8

  2. XM_027775769.1 → XP_027631570.1  microtubule-actin cross-linking factor 1 isoform X2

    UniProtKB/TrEMBL
    L9JCY8

  3. XM_027775770.1 → XP_027631571.1  microtubule-actin cross-linking factor 1 isoform X3

    UniProtKB/TrEMBL
    L9JCY8

  4. XM_027775772.1 → XP_027631573.1  microtubule-actin cross-linking factor 1 isoform X5

  5. XM_027775771.1 → XP_027631572.1  microtubule-actin cross-linking factor 1 isoform X4

    UniProtKB/TrEMBL
    L9JCY8

  6. XM_027775773.1 → XP_027631574.1  microtubule-actin cross-linking factor 1 isoform X6

  7. XM_027775774.1 → XP_027631575.1  microtubule-actin cross-linking factor 1 isoform X7

  8. XM_027775775.1 → XP_027631576.1  microtubule-actin cross-linking factor 1 isoform X8

Nucleotide Protein
Heading Accession and Version

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