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IFIT5 interferon induced protein with tetratricopeptide repeats 5 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102480668, updated on 10-Mar-2024

Summary

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Gene symbol
IFIT5
Gene description
interferon induced protein with tetratricopeptide repeats 5
Locus tag
TREES_T100006491
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human all
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Genomic context

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See IFIT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159692.1 (1644163..1652269)

NW_006159692.1Genomic Context describing neighboring genes Neighboring gene interferon-induced protein with tetratricopeptide repeats 1B Neighboring gene interferon-induced protein with tetratricopeptide repeats 1 Neighboring gene solute carrier family 16 member 12 Neighboring gene small nucleolar RNA SNORA1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159692 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-induced protein with tetratricopeptide repeats 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159692.1 Reference TupChi_1.0

    Range
    1644163..1652269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006147619.3 → XP_006147681.1  interferon-induced protein with tetratricopeptide repeats 5

    See identical proteins and their annotated locations for XP_006147681.1

    UniProtKB/TrEMBL
    L9KZW1
    Conserved Domains (2) summary
    sd00006
    Location:249 → 277
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:50 → 120
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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