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PLEKHF1 pleckstrin homology and FYVE domain containing 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102470999, updated on 10-Mar-2024

Summary

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Gene symbol
PLEKHF1
Gene description
pleckstrin homology and FYVE domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006205257.1 (5653984..5665701, complement)

NW_006205257.1Genomic Context describing neighboring genes Neighboring gene protein C19orf12 homolog Neighboring gene protein C19orf12 homolog Neighboring gene POP4 homolog, ribonuclease P/MRP subunit Neighboring gene U6 spliceosomal RNA Neighboring gene V-set and transmembrane domain containing 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006205257 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family F member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006205257.1 Reference TupChi_1.0

    Range
    5653984..5665701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006168005.2 → XP_006168067.1  pleckstrin homology domain-containing family F member 1 isoform X2

    See identical proteins and their annotated locations for XP_006168067.1

    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    pfam00169
    Location:39 → 131
    PH; PH domain
    cl22851
    Location:148 → 211
    PHD_SF; PHD finger superfamily

  2. XM_027768068.1 → XP_027623869.1  pleckstrin homology domain-containing family F member 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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