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NSMCE1 NSE1 homolog, SMC5-SMC6 complex component [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102470551, updated on 10-Mar-2024

Summary

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Gene symbol
NSMCE1
Gene description
NSE1 homolog, SMC5-SMC6 complex component
Locus tag
TREES_T100000540
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159706.1 (3689452..3739579)

NW_006159706.1Genomic Context describing neighboring genes Neighboring gene pollen-specific leucine-rich repeat extensin-like protein 1 Neighboring gene interleukin 4 receptor Neighboring gene single-stranded DNA-binding protein, mitochondrial pseudogene Neighboring gene lysine demethylase 8 Neighboring gene ribosome biogenesis protein NSA2 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159706 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-structural maintenance of chromosomes element 1 homolog
Names
Non-structural maintenance of chromosomes element 1 like protein
non-SMC element 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159706.1 Reference TupChi_1.0

    Range
    3689452..3739579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006148262.3 → XP_006148324.1  non-structural maintenance of chromosomes element 1 homolog isoform X2

    UniProtKB/TrEMBL
    L9KUC0
    Conserved Domains (2) summary
    pfam07574
    Location:9 → 168
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
    pfam08746
    Location:184 → 224
    zf-RING-like; RING-like domain

  2. XM_006148261.3 → XP_006148323.1  non-structural maintenance of chromosomes element 1 homolog isoform X1

    UniProtKB/TrEMBL
    L9KUC0
    Conserved Domains (2) summary
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
    pfam08746
    Location:191 → 231
    zf-RING-like; RING-like domain

  3. XM_027771794.1 → XP_027627595.1  non-structural maintenance of chromosomes element 1 homolog isoform X3

    UniProtKB/TrEMBL
    L9KUC0

RNA

  1. XR_334521.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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