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STBD1 starch binding domain 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102464023, updated on 10-Mar-2024

Summary

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Gene symbol
STBD1
Gene description
starch binding domain 1
See related
Ensembl:ENSPSIG00000001756
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858289.1 (1474441..1476501, complement)

NW_005858289.1Genomic Context describing neighboring genes Neighboring gene shroom family member 3 Neighboring gene coiled-coil domain containing 158 Neighboring gene protein FAM47E Neighboring gene scavenger receptor class B member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005858289 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005858289.1 Reference PelSin_1.0 Primary Assembly

    Range
    1474441..1476501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006133879.3 → XP_006133941.1  starch-binding domain-containing protein 1

    UniProtKB/TrEMBL
    K7F139
    Related
    ENSPSIP00000001749.1, ENSPSIT00000001756.1
    Conserved Domains (1) summary
    cd05813
    Location:121 → 215
    CBM20_genethonin_1; Genethonin-1, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Genethonin-1 is a human skeletal muscle protein with no known function. It contains a C-terminal CBM20 domain. The CBM20 domain is found in a large number of starch ...
Nucleotide Protein
Heading Accession and Version

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