U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COL9A2 collagen type IX alpha 2 chain [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102459957, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
COL9A2
Gene description
collagen type IX alpha 2 chain
See related
Ensembl:ENSPSIG00000013876
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005855819.1 (180405..226350, complement)

NW_005855819.1Genomic Context describing neighboring genes Neighboring gene small ArfGAP2 Neighboring gene regulating synaptic membrane exocytosis 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005855819 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
Names
collagen alpha-2(IX) chain
collagen, type IX, alpha 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005855819.1 Reference PelSin_1.0 Primary Assembly

    Range
    180405..226350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025186064.1 → XP_025041849.1  LOW QUALITY PROTEIN: collagen alpha-2(IX) chain

    Related
    ENSPSIP00000015820.1, ENSPSIT00000015895.1
    Conserved Domains (2) summary
    pfam01391
    Location:309 → 367
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09606
    Location:181 → 513
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.