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FIGN fidgetin, microtubule severing factor [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102447646, updated on 10-Mar-2024

Summary

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Gene symbol
FIGN
Gene description
fidgetin, microtubule severing factor
See related
Ensembl:ENSPSIG00000002837
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005871000.1 (3574416..3693556)

NW_005871000.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 14 Neighboring gene uncharacterized LOC112543754 Neighboring gene uncharacterized LOC112543747

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871000 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule severing ATPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fidgetin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005871000.1 Reference PelSin_1.0 Primary Assembly

    Range
    3574416..3693556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006137333.2 → XP_006137395.1  fidgetin isoform X1

    UniProtKB/TrEMBL
    K7F4G5
    Related
    ENSPSIP00000002925.1, ENSPSIT00000002936.1
    Conserved Domains (3) summary
    smart00382
    Location:509 → 644
    AAA; ATPases associated with a variety of cellular activities
    pfam00004
    Location:512 → 642
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09336
    Location:713 → 746
    Vps4_C; Vps4 C terminal oligomerization domain

  2. XM_006137334.2 → XP_006137396.1  fidgetin isoform X2

    See identical proteins and their annotated locations for XP_006137396.1

    Conserved Domains (1) summary
    COG0464
    Location:450 → 725
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

  3. XM_025178603.1 → XP_025034388.1  fidgetin isoform X2

    Conserved Domains (1) summary
    COG0464
    Location:450 → 725
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

  4. XM_025178604.1 → XP_025034389.1  fidgetin isoform X2

    Conserved Domains (1) summary
    COG0464
    Location:450 → 725
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

  5. XM_025178602.1 → XP_025034387.1  fidgetin isoform X2

    Conserved Domains (1) summary
    COG0464
    Location:450 → 725
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

RNA

  1. XR_003086974.1 RNA Sequence

  2. XR_001369210.2 RNA Sequence

  3. XR_001369211.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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