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ALMS1 ALMS1 centrosome and basal body associated protein [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102445049, updated on 10-Mar-2024

Summary

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Gene symbol
ALMS1
Gene description
ALMS1 centrosome and basal body associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853125.1 (3047705..3081669, complement)

NW_005853125.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112544577 Neighboring gene disintegrin and metalloproteinase domain-containing protein 33-like Neighboring gene Alstrom syndrome protein 1-like Neighboring gene F-box protein 41 Neighboring gene chaperonin containing TCP1 subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853125 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alstrom syndrome protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853125.1 Reference PelSin_1.0 Primary Assembly

    Range
    3047705..3081669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025181007.1 → XP_025036792.1  Alstrom syndrome protein 1 isoform X3

    Conserved Domains (1) summary
    pfam15309
    Location:164 → 323
    ALMS_motif; ALMS motif

  2. XM_006115624.1 → XP_006115686.1  Alstrom syndrome protein 1 isoform X2

    Conserved Domains (1) summary
    pfam15309
    Location:408 → 538
    ALMS_motif; ALMS motif

  3. XM_025181006.1 → XP_025036791.1  Alstrom syndrome protein 1 isoform X1

    Conserved Domains (1) summary
    pfam15309
    Location:408 → 567
    ALMS_motif; ALMS motif
Nucleotide Protein
Heading Accession and Version

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