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PDCD4 programmed cell death 4 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102443702, updated on 10-Mar-2024

Summary

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Gene symbol
PDCD4
Gene description
programmed cell death 4
See related
Ensembl:ENSPSIG00000010097
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858857.1 (4675613..4701427, complement)

NW_005858857.1Genomic Context describing neighboring genes Neighboring gene SHOC2 leucine rich repeat scaffold protein Neighboring gene BBSome interacting protein 1 Neighboring gene RNA binding motif protein 20 Neighboring gene structural maintenance of chromosomes 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005858857 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 4
Names
programmed cell death 4 (neoplastic transformation inhibitor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005858857.1 Reference PelSin_1.0 Primary Assembly

    Range
    4675613..4701427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006135003.3 → XP_006135065.1  programmed cell death protein 4

    See identical proteins and their annotated locations for XP_006135065.1

    UniProtKB/TrEMBL
    K7FSZ2
    Related
    ENSPSIP00000011152.1, ENSPSIT00000011208.1
    Conserved Domains (1) summary
    smart00544
    Location:326 → 439
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  2. XM_006135004.3 → XP_006135066.1  programmed cell death protein 4

    See identical proteins and their annotated locations for XP_006135066.1

    UniProtKB/TrEMBL
    K7FSZ2
    Conserved Domains (1) summary
    smart00544
    Location:326 → 439
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  3. XM_014579489.2 → XP_014434975.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    K7FSZ2
    Conserved Domains (1) summary
    smart00544
    Location:326 → 439
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  4. XM_014579488.2 → XP_014434974.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    K7FSZ2
    Conserved Domains (1) summary
    smart00544
    Location:326 → 439
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
Nucleotide Protein
Heading Accession and Version

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