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PDX1 pancreatic and duodenal homeobox 1 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102442594, updated on 30-Mar-2024

Summary

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Gene symbol
PDX1
Gene description
pancreatic and duodenal homeobox 1
See related
Ensembl:ENSMLUG00000010639
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See PDX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871275.1 (1027611..1031765)

NW_005871275.1Genomic Context describing neighboring genes Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene Neighboring gene 60S ribosomal protein L36a-like Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene caudal type homeobox 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871275 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in type B pancreatic cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pancreas/duodenum homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871275.1 Reference Myoluc2.0

    Range
    1027611..1031765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006098268.1 → XP_006098330.1  pancreas/duodenum homeobox protein 1

    UniProtKB/TrEMBL
    G1PGD4
    Related
    ENSMLUP00000009694.2, ENSMLUT00000010634.2
    Conserved Domains (1) summary
    pfam00046
    Location:148 → 201
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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