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ZC3H6 zinc finger CCCH-type containing 6 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102439824, updated on 30-Mar-2024

Summary

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Gene symbol
ZC3H6
Gene description
zinc finger CCCH-type containing 6
See related
Ensembl:ENSMLUG00000004896
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871655.1 (303296..354809, complement)

NW_005871655.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase I subunit B Neighboring gene tubulin tyrosine ligase Neighboring gene zinc finger CCCH-type containing 8 Neighboring gene fibulin 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871655 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871655.1 Reference Myoluc2.0

    Range
    303296..354809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023745957.1 → XP_023601725.1  zinc finger CCCH domain-containing protein 6 isoform X4

    UniProtKB/TrEMBL
    G1P3G5
    Conserved Domains (2) summary
    smart00356
    Location:203 → 227
    ZnF_C3H1; zinc finger
    COG5084
    Location:177 → 251
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

  2. XM_023745956.1 → XP_023601724.1  zinc finger CCCH domain-containing protein 6 isoform X2

    UniProtKB/TrEMBL
    G1P3G5
    Conserved Domains (3) summary
    smart00356
    Location:319 → 343
    ZnF_C3H1; zinc finger
    COG5084
    Location:293 → 367
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
    cl26464
    Location:987 → 1145
    Atrophin-1; Atrophin-1 family

  3. XM_023745958.1 → XP_023601726.1  zinc finger CCCH domain-containing protein 6 isoform X5

    UniProtKB/TrEMBL
    G1P3G5
    Conserved Domains (2) summary
    smart00356
    Location:180 → 204
    ZnF_C3H1; zinc finger
    COG5084
    Location:154 → 228
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

  4. XM_014447054.2 → XP_014302540.2  zinc finger CCCH domain-containing protein 6 isoform X3

    UniProtKB/TrEMBL
    G1P3G5
    Related
    ENSMLUP00000004461.2, ENSMLUT00000004896.2
    Conserved Domains (2) summary
    smart00356
    Location:317 → 341
    ZnF_C3H1; zinc finger
    pfam15663
    Location:314 → 371
    zf-CCCH_3; Zinc-finger containing family

  5. XM_023745955.1 → XP_023601723.1  zinc finger CCCH domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    G1P3G5
    Conserved Domains (2) summary
    smart00356
    Location:337 → 361
    ZnF_C3H1; zinc finger
    pfam15663
    Location:334 → 391
    zf-CCCH_3; Zinc-finger containing family
Nucleotide Protein
Heading Accession and Version

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