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NIN ninein [ Myotis lucifugus (little brown bat) ]

Gene ID: 102433805, updated on 30-Mar-2024

Summary

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Gene symbol
NIN
Gene description
ninein
See related
Ensembl:ENSMLUG00000003310
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871352.1 (771008..870947)

NW_005871352.1Genomic Context describing neighboring genes Neighboring gene glycogen phosphorylase L Neighboring gene abhydrolase domain containing 12B Neighboring gene proteasome activator complex subunit 2 pseudogene Neighboring gene salvador family WW domain containing protein 1 Neighboring gene atlastin GTPase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871352 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in centrosome-templated microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule anchoring at centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary transition fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitotic spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in pericentriolar material IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ninein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871352.1 Reference Myoluc2.0

    Range
    771008..870947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014465629.2 → XP_014321115.1  ninein isoform X1

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (5) summary
    COG0419
    Location:1544 → 2153
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1196
    Location:520 → 1373
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1086 → 1848
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl19219
    Location:509 → 602
    DUF342; Protein of unknown function (DUF342)
    cl23750
    Location:445 → 538
    vATP-synt_E; ATP synthase (E/31 kDa) subunit

  2. XM_023763873.1 → XP_023619641.1  ninein isoform X3

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (2) summary
    cl25732
    Location:520 → 1373
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27549
    Location:402 → 614
    V_ATPase_I; V-type ATPase 116kDa subunit family

  3. XM_023763874.1 → XP_023619642.1  ninein isoform X4

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (2) summary
    cl25732
    Location:471 → 1324
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27549
    Location:353 → 565
    V_ATPase_I; V-type ATPase 116kDa subunit family

  4. XM_006100231.3 → XP_006100293.1  ninein isoform X2

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (5) summary
    COG0419
    Location:1514 → 2123
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1196
    Location:490 → 1343
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1056 → 1818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl19219
    Location:479 → 572
    DUF342; Protein of unknown function (DUF342)
    cl23750
    Location:415 → 508
    vATP-synt_E; ATP synthase (E/31 kDa) subunit

  5. XM_014465631.2 → XP_014321117.1  ninein isoform X5

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (5) summary
    COG1196
    Location:520 → 1373
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1086 → 1848
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam10212
    Location:776 → 1005
    TTKRSYEDQ; Predicted coiled-coil domain-containing protein
    cl19219
    Location:509 → 602
    DUF342; Protein of unknown function (DUF342)
    cl23750
    Location:445 → 538
    vATP-synt_E; ATP synthase (E/31 kDa) subunit

  6. XM_006100233.3 → XP_006100295.1  ninein isoform X6

    UniProtKB/TrEMBL
    G1NZV7
    Related
    ENSMLUP00000003016.2, ENSMLUT00000003318.2
    Conserved Domains (4) summary
    COG1196
    Location:490 → 1343
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:1056 → 1818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl19219
    Location:479 → 572
    DUF342; Protein of unknown function (DUF342)
    cl23750
    Location:415 → 508
    vATP-synt_E; ATP synthase (E/31 kDa) subunit

  7. XM_023763875.1 → XP_023619643.1  ninein isoform X7

    UniProtKB/TrEMBL
    G1NZV7
    Conserved Domains (2) summary
    cl25732
    Location:520 → 1373
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27549
    Location:402 → 614
    V_ATPase_I; V-type ATPase 116kDa subunit family

  8. XM_006100234.3 → XP_006100296.1  ninein isoform X8

    Conserved Domains (4) summary
    COG1340
    Location:658 → 923
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    TIGR04523
    Location:784 → 1254
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    cl19219
    Location:479 → 572
    DUF342; Protein of unknown function (DUF342)
    cl23750
    Location:415 → 508
    vATP-synt_E; ATP synthase (E/31 kDa) subunit
Nucleotide Protein
Heading Accession and Version

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