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PTPRH protein tyrosine phosphatase receptor type H [ Bubalus bubalis (water buffalo) ]

Gene ID: 102414819, updated on 10-Mar-2024

Summary

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Gene symbol
PTPRH
Gene description
protein tyrosine phosphatase receptor type H
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PTPRH in Genome Data Viewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (62129393..62145982)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (62374056..62390639)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 6 regulatory subunit 1 Neighboring gene transmembrane protein 86B Neighboring gene synaptotagmin 5 Neighboring gene dynein axonemal assembly factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    62129393..62145982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006064003.4 → XP_006064065.3  receptor-type tyrosine-protein phosphatase H

    Conserved Domains (2) summary
    cd00063
    Location:31 → 106
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl28904
    Location:401 → 633
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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