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PRKRIP1 PRKR interacting protein 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413382, updated on 10-Mar-2024

Summary

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Gene symbol
PRKRIP1
Gene description
PRKR interacting protein 1
See related
EnsemblRapid:ENSBALG00030040181
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
10
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 24 NC_059180.1 (7619453..7664857)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 24 NC_058366.1 (7596950..7642339)

Chromosome 24 - NC_059180.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene small nuclear ribonucleoprotein Sm D1-like Neighboring gene uncharacterized LOC112581803 Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene leucine rich repeats and WD repeat domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PRKR-interacting protein 1
Names
PRKR interacting protein 1 (IL11 inducible)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059180.1 Reference NDDB_SH_1 Primary Assembly

    Range
    7619453..7664857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044935910.2 → XP_044791845.1  PRKR-interacting protein 1 isoform X3

  2. XM_044935908.2 → XP_044791843.1  PRKR-interacting protein 1 isoform X1

    Related
    ENSBALP00030073843.1, ENSBALT00030110979.1

  3. XM_025275090.3 → XP_025130875.1  PRKR-interacting protein 1 isoform X5

    Related
    ENSBALP00030073846.1, ENSBALT00030110986.1
    Conserved Domains (1) summary
    pfam06658
    Location:42 → 125
    DUF1168; Protein of unknown function (DUF1168)

  4. XM_006059465.4 → XP_006059527.1  PRKR-interacting protein 1 isoform X4

    Related
    ENSBALP00030073856.1, ENSBALT00030111007.1
    Conserved Domains (1) summary
    pfam06658
    Location:42 → 179
    DUF1168; Protein of unknown function (DUF1168)

  5. XM_044935909.2 → XP_044791844.1  PRKR-interacting protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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