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PLAA phospholipase A2 activating protein [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413352, updated on 10-Mar-2024

Summary

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Gene symbol
PLAA
Gene description
phospholipase A2 activating protein
See related
EnsemblRapid:ENSBALG00030037246
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (79880957..79921454)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (78946270..78986764)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene intraflagellar transport 74 Neighboring gene leucine rich repeat containing 19 Neighboring gene caspase activity and apoptosis inhibitor 1 Neighboring gene uncharacterized LOC112583852

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A-2-activating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    79880957..79921454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006075600.3 → XP_006075662.1  phospholipase A-2-activating protein isoform X2

    Related
    ENSBALP00030068810.1, ENSBALT00030103109.1
    Conserved Domains (6) summary
    COG2319
    Location:8 → 296
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:10 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam05831
    Location:298 → 352
    GAGE; GAGE protein
    pfam08324
    Location:513 → 766
    PUL; PUL domain
    pfam09070
    Location:346 → 458
    PFU; PFU (PLAA family ubiquitin binding)
    sd00039
    Location:68 → 110
    7WD40; WD40 repeat [structural motif]

  2. XM_006075599.3 → XP_006075661.1  phospholipase A-2-activating protein isoform X1

    Related
    ENSBALP00030068830.1, ENSBALT00030103129.1
    Conserved Domains (6) summary
    COG2319
    Location:8 → 296
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:10 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam05831
    Location:298 → 352
    GAGE; GAGE protein
    pfam08324
    Location:537 → 790
    PUL; PUL domain
    pfam09070
    Location:346 → 458
    PFU; PFU (PLAA family ubiquitin binding)
    sd00039
    Location:68 → 110
    7WD40; WD40 repeat [structural motif]

  3. XM_025281425.2 → XP_025137210.1  phospholipase A-2-activating protein isoform X3

    Conserved Domains (4) summary
    cd00200
    Location:2 → 154
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:11 → 45
    7WD40; WD40 repeat [structural motif]
    pfam08324
    Location:394 → 647
    PUL; PUL domain
    pfam09070
    Location:203 → 312
    PFU; PFU (PLAA family ubiquitin binding)
Nucleotide Protein
Heading Accession and Version

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