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PRRC2C proline rich coiled-coil 2C [ Bubalus bubalis (water buffalo) ]

Gene ID: 102411037, updated on 10-Mar-2024

Summary

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Gene symbol
PRRC2C
Gene description
proline rich coiled-coil 2C
See related
EnsemblRapid:ENSBALG00030002092
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
36
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (41979395..42075467, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (40659776..40755847, complement)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123333699 Neighboring gene uncharacterized LOC123333698 Neighboring gene myocilin Neighboring gene uncharacterized LOC123333700 Neighboring gene flavin containing dimethylaniline monoxygenase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PRRC2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    41979395..42075467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044943026.2 → XP_044798961.1  protein PRRC2C isoform X6

    Conserved Domains (3) summary
    PHA03247
    Location:1717 → 2003
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1546 → 1842
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 160
    BAT2_N; BAT2 N-terminus

  2. XM_044943023.2 → XP_044798958.1  protein PRRC2C isoform X3

    Conserved Domains (3) summary
    PHA03247
    Location:1717 → 2003
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1546 → 1842
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 160
    BAT2_N; BAT2 N-terminus

  3. XM_044943025.2 → XP_044798960.1  protein PRRC2C isoform X5

    Conserved Domains (3) summary
    PHA03247
    Location:1714 → 2000
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1543 → 1839
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 157
    BAT2_N; BAT2 N-terminus

  4. XM_044943022.2 → XP_044798957.1  protein PRRC2C isoform X2

    Conserved Domains (4) summary
    PHA03247
    Location:1717 → 2003
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK14951
    Location:1746 → 1851
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  5. XM_044943027.2 → XP_044798962.1  protein PRRC2C isoform X7

    Conserved Domains (3) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  6. XM_044943024.2 → XP_044798959.1  protein PRRC2C isoform X4

    Conserved Domains (3) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  7. XM_044943021.2 → XP_044798956.1  protein PRRC2C isoform X1

    Related
    ENSBALP00030004000.1, ENSBALT00030005970.1
    Conserved Domains (3) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  8. XM_044943031.2 → XP_044798966.1  protein PRRC2C isoform X11

    Related
    ENSBALP00030003915.1, ENSBALT00030005841.1
    Conserved Domains (3) summary
    PHA03247
    Location:1717 → 2003
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1546 → 1842
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 160
    BAT2_N; BAT2 N-terminus

  9. XM_044943030.2 → XP_044798965.1  protein PRRC2C isoform X10

    Related
    ENSBALP00030003933.1, ENSBALT00030005870.1
    Conserved Domains (3) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  10. XM_044943029.2 → XP_044798964.1  protein PRRC2C isoform X9

    Related
    ENSBALP00030004012.1, ENSBALT00030005989.1
    Conserved Domains (3) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam07001
    Location:1 → 162
    BAT2_N; BAT2 N-terminus

  11. XM_044943033.1 → XP_044798968.1  protein PRRC2C isoform X13

    Related
    ENSBALP00030003961.1, ENSBALT00030005914.1
    Conserved Domains (2) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional

  12. XM_044943032.1 → XP_044798967.1  protein PRRC2C isoform X12

    Related
    ENSBALP00030003972.1, ENSBALT00030005932.1
    Conserved Domains (2) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional

  13. XM_044943028.1 → XP_044798963.1  protein PRRC2C isoform X8

    Related
    ENSBALP00030003984.1, ENSBALT00030005950.1
    Conserved Domains (2) summary
    PHA03247
    Location:1719 → 2005
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:1548 → 1844
    PHA03307; transcriptional regulator ICP4; Provisional
Nucleotide Protein
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