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FBLIM1 filamin binding LIM protein 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102408387, updated on 10-Mar-2024

Summary

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Gene symbol
FBLIM1
Gene description
filamin binding LIM protein 1
See related
EnsemblRapid:ENSBALG00030002116
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (29269894..29295762)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (28778545..28804198)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 34 Neighboring gene transmembrane protein 82 Neighboring gene uncharacterized LOC123333678 Neighboring gene uncharacterized LOC123333679 Neighboring gene dehydrodolichyl diphosphate synthase complex subunit NUS1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables filamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    29269894..29295762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006072780.4 → XP_006072842.1  filamin-binding LIM protein 1 isoform X2

    See identical proteins and their annotated locations for XP_006072842.1

    Conserved Domains (2) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. XM_025285666.3 → XP_025141451.1  filamin-binding LIM protein 1 isoform X2

    Related
    ENSBALP00030003939.1, ENSBALT00030005881.1
    Conserved Domains (2) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  3. XM_006072779.4 → XP_006072841.1  filamin-binding LIM protein 1 isoform X2

    See identical proteins and their annotated locations for XP_006072841.1

    Related
    ENSBALP00030003969.1, ENSBALT00030005927.1
    Conserved Domains (2) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  4. XM_025285665.3 → XP_025141450.1  filamin-binding LIM protein 1 isoform X2

    Related
    ENSBALP00030003962.1, ENSBALT00030005916.1
    Conserved Domains (2) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  5. XM_044942866.2 → XP_044798801.1  filamin-binding LIM protein 1 isoform X3

    Related
    ENSBALP00030003977.1, ENSBALT00030005938.1

  6. XM_044942865.2 → XP_044798800.1  filamin-binding LIM protein 1 isoform X1

    Related
    ENSBALP00030003947.1, ENSBALT00030005891.1
Nucleotide Protein
Heading Accession and Version

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