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LOC102406330 alpha-amylase 2B [ Bubalus bubalis (water buffalo) ]

Gene ID: 102406330, updated on 28-Nov-2023

Summary

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Gene symbol
LOC102406330
Gene description
alpha-amylase 2B
See related
EnsemblRapid:ENSBALG00030023367
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
AMY2B
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Genomic context

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See LOC102406330 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (39900052..39924526, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (39505743..39530218, complement)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene NEDD8-conjugating enzyme UBE2F-like Neighboring gene alpha-amylase 2B Neighboring gene RNA binding region (RNP1, RRM) containing 3 Neighboring gene superoxide dismutase [Mn], mitochondrial-like Neighboring gene collagen type XI alpha 1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-amylase 2B
Names
amylase, alpha 2B (pancreatic)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    39900052..39924526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006050158.4 → XP_006050220.4  alpha-amylase 2B

  2. XM_006050159.4 → XP_006050221.4  alpha-amylase 2B

    Related
    ENSBALP00030044608.1, ENSBALT00030065691.1
Nucleotide Protein
Heading Accession and Version

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