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LOC102405376 myosin-1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102405376, updated on 28-Nov-2023

Summary

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Gene symbol
LOC102405376
Gene description
myosin-1
See related
EnsemblRapid:ENSBALG00030015795
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
MYH1; MyHC2x; MyHC-2x
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Genomic context

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Location:
chromosome: 3
Exon count:
40
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (33585218..33609493)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (33548076..33572576)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene myosin-3 Neighboring gene myosin-2 Neighboring gene myosin-4 Neighboring gene uncharacterized LOC123332641 Neighboring gene myosin-8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin-1
Names
myosin heavy chain 1
myosin heavy chain 2x

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    33585218..33609493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025280549.3 → XP_025136334.1  myosin-1

    Related
    ENSBALP00030029264.1, ENSBALT00030044242.1
    Conserved Domains (3) summary
    cd01377
    Location:100 → 769
    MYSc_class_II; class II myosins, motor domain
    pfam02736
    Location:35 → 73
    Myosin_N; Myosin N-terminal SH3-like domain
    cl25732
    Location:849 → 1926
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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