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UBAP2L ubiquitin associated protein 2 like [ Bubalus bubalis (water buffalo) ]

Gene ID: 102405004, updated on 10-Mar-2024

Summary

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Gene symbol
UBAP2L
Gene description
ubiquitin associated protein 2 like
See related
EnsemblRapid:ENSBALG00030024363
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
34
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (16308415..16355849, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (15828277..15875713, complement)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene aquaporin 10 Neighboring gene HCLS1 associated protein X-1 Neighboring gene small nucleolar RNA SNORA58 Neighboring gene small nucleolar RNA SNORA58 Neighboring gene chromosome 6 C1orf43 homolog Neighboring gene cilia and flagella associated protein 141 Neighboring gene tropomyosin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    16308415..16355849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025287771.2 → XP_025143556.1  ubiquitin-associated protein 2-like isoform X22

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  2. XM_044944320.1 → XP_044800255.1  ubiquitin-associated protein 2-like isoform X18

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  3. XM_044944321.1 → XP_044800256.1  ubiquitin-associated protein 2-like isoform X21

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  4. XM_044944319.1 → XP_044800254.1  ubiquitin-associated protein 2-like isoform X17

    Related
    ENSBALP00030046468.1, ENSBALT00030068526.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  5. XM_025287765.2 → XP_025143550.1  ubiquitin-associated protein 2-like isoform X10

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:516 → 543
    DUF3697; Ubiquitin-associated protein 2

  6. XM_025287770.2 → XP_025143555.1  ubiquitin-associated protein 2-like isoform X20

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:507 → 534
    DUF3697; Ubiquitin-associated protein 2

  7. XM_025287769.2 → XP_025143554.1  ubiquitin-associated protein 2-like isoform X19

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:507 → 534
    DUF3697; Ubiquitin-associated protein 2

  8. XM_025287767.2 → XP_025143552.1  ubiquitin-associated protein 2-like isoform X13

    Related
    ENSBALP00030046645.1, ENSBALT00030068814.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  9. XM_025287762.2 → XP_025143547.1  ubiquitin-associated protein 2-like isoform X7

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  10. XM_006044178.3 → XP_006044240.1  ubiquitin-associated protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006044240.1

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  11. XM_044944312.1 → XP_044800247.1  ubiquitin-associated protein 2-like isoform X1

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  12. XM_006044177.3 → XP_006044239.1  ubiquitin-associated protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006044239.1

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  13. XM_025287758.2 → XP_025143543.1  ubiquitin-associated protein 2-like isoform X2

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  14. XM_006044176.3 → XP_006044238.1  ubiquitin-associated protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006044238.1

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  15. XM_044944314.1 → XP_044800249.1  ubiquitin-associated protein 2-like isoform X5

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:509 → 536
    DUF3697; Ubiquitin-associated protein 2

  16. XM_044944318.1 → XP_044800253.1  ubiquitin-associated protein 2-like isoform X16

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  17. XM_044944316.1 → XP_044800251.1  ubiquitin-associated protein 2-like isoform X12

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  18. XM_025287768.2 → XP_025143553.1  ubiquitin-associated protein 2-like isoform X15

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  19. XM_025287766.2 → XP_025143551.1  ubiquitin-associated protein 2-like isoform X11

    Related
    ENSBALP00030046696.1, ENSBALT00030068885.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  20. XM_025287764.2 → XP_025143549.1  ubiquitin-associated protein 2-like isoform X9

    Related
    ENSBALP00030046555.1, ENSBALT00030068670.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:516 → 543
    DUF3697; Ubiquitin-associated protein 2

  21. XM_025287759.2 → XP_025143544.1  ubiquitin-associated protein 2-like isoform X3

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:516 → 543
    DUF3697; Ubiquitin-associated protein 2

  22. XM_044944317.1 → XP_044800252.1  ubiquitin-associated protein 2-like isoform X14

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:507 → 534
    DUF3697; Ubiquitin-associated protein 2

  23. XM_044944315.1 → XP_044800250.1  ubiquitin-associated protein 2-like isoform X8

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:507 → 534
    DUF3697; Ubiquitin-associated protein 2

  24. XM_025287761.2 → XP_025143546.1  ubiquitin-associated protein 2-like isoform X6

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  25. XM_044944313.1 → XP_044800248.1  ubiquitin-associated protein 2-like isoform X4

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  26. XM_006044179.3 → XP_006044241.1  ubiquitin-associated protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006044241.1

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2

  27. XM_044944322.1 → XP_044800257.1  ubiquitin-associated protein 2-like isoform X25

    Related
    ENSBALP00030046440.1, ENSBALT00030068479.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:489 → 516
    DUF3697; Ubiquitin-associated protein 2

  28. XM_025287774.2 → XP_025143559.1  ubiquitin-associated protein 2-like isoform X24

    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:496 → 523
    DUF3697; Ubiquitin-associated protein 2

  29. XM_025287772.2 → XP_025143557.1  ubiquitin-associated protein 2-like isoform X23

    Related
    ENSBALP00030046400.1, ENSBALT00030068415.1
    Conserved Domains (2) summary
    cd14277
    Location:50 → 87
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:527 → 554
    DUF3697; Ubiquitin-associated protein 2
Nucleotide Protein
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