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JSRP1 junctional sarcoplasmic reticulum protein 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102404161, updated on 10-Mar-2024

Summary

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Gene symbol
JSRP1
Gene description
junctional sarcoplasmic reticulum protein 1
See related
EnsemblRapid:ENSBALG00030009742
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 9 NC_059165.1 (89818239..89822159)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 9 NC_058351.1 (88747887..88751807)

Chromosome 9 - NC_059165.1Genomic Context describing neighboring genes Neighboring gene IZUMO family member 4 Neighboring gene adaptor related protein complex 3 subunit delta 1 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene anti-Mullerian hormone Neighboring gene splicing factor 3a subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of ryanodine-sensitive calcium-release channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctional sarcoplasmic reticulum protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059165.1 Reference NDDB_SH_1 Primary Assembly

    Range
    89818239..89822159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044947892.1 → XP_044803827.1  junctional sarcoplasmic reticulum protein 1 isoform X1

    Conserved Domains (1) summary
    PRK12678
    Location:172 → 358
    PRK12678; transcription termination factor Rho; Provisional

  2. XM_044947893.1 → XP_044803828.1  junctional sarcoplasmic reticulum protein 1 isoform X2

    Conserved Domains (1) summary
    PRK12678
    Location:157 → 343
    PRK12678; transcription termination factor Rho; Provisional

  3. XM_006047811.3 → XP_006047873.1  junctional sarcoplasmic reticulum protein 1 isoform X3

    Related
    ENSBALP00030018025.1, ENSBALT00030027088.1
    Conserved Domains (1) summary
    pfam15312
    Location:123 → 179
    JSRP; Junctional sarcoplasmic reticulum protein
Nucleotide Protein
Heading Accession and Version

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