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CPED1 cadherin like and PC-esterase domain containing 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102402972, updated on 10-Mar-2024

Summary

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Gene symbol
CPED1
Gene description
cadherin like and PC-esterase domain containing 1
See related
EnsemblRapid:ENSBALG00030005628
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 8 NC_059164.1 (84990477..85313327)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 8 NC_058350.1 (84207981..84530859)

Chromosome 8 - NC_059164.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 12 Neighboring gene inhibitor of growth family member 3 Neighboring gene U4 spliceosomal RNA Neighboring gene Wnt family member 16 Neighboring gene FAM3 metabolism regulating signaling molecule C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cadherin-like and PC-esterase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059164.1 Reference NDDB_SH_1 Primary Assembly

    Range
    84990477..85313327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006049635.4 → XP_006049697.3  cadherin-like and PC-esterase domain-containing protein 1 isoform X4

    Related
    ENSBALP00030010537.1, ENSBALT00030015807.1
    Conserved Domains (1) summary
    pfam12733
    Location:579 → 665
    Cadherin-like; Cadherin-like beta sandwich domain

  2. XM_006049634.4 → XP_006049696.3  cadherin-like and PC-esterase domain-containing protein 1 isoform X3

    Related
    ENSBALP00030010522.1, ENSBALT00030015788.1
    Conserved Domains (1) summary
    pfam12733
    Location:544 → 630
    Cadherin-like; Cadherin-like beta sandwich domain

  3. XM_045166432.1 → XP_045022367.1  cadherin-like and PC-esterase domain-containing protein 1 isoform X1

    Related
    ENSBALP00030010546.1, ENSBALT00030015819.1
    Conserved Domains (1) summary
    pfam12733
    Location:579 → 665
    Cadherin-like; Cadherin-like beta sandwich domain

  4. XM_006049633.4 → XP_006049695.3  cadherin-like and PC-esterase domain-containing protein 1 isoform X2

    Related
    ENSBALP00030010502.1, ENSBALT00030015764.1
    Conserved Domains (1) summary
    pfam12733
    Location:562 → 648
    Cadherin-like; Cadherin-like beta sandwich domain

  5. XM_044946826.2 → XP_044802761.2  cadherin-like and PC-esterase domain-containing protein 1 isoform X1

    Conserved Domains (1) summary
    pfam12733
    Location:579 → 665
    Cadherin-like; Cadherin-like beta sandwich domain

  6. XM_006049636.4 → XP_006049698.3  cadherin-like and PC-esterase domain-containing protein 1 isoform X5

    Conserved Domains (1) summary
    pfam12733
    Location:410 → 496
    Cadherin-like; Cadherin-like beta sandwich domain

RNA

  1. XR_326762.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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