U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RHBDL2 rhomboid like 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102400102, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RHBDL2
Gene description
rhomboid like 2
See related
EnsemblRapid:ENSBALG00030028613
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (106663288..106722352)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (105723134..105782201)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene NADH-cytochrome b5 reductase 3-like Neighboring gene gap junction protein alpha 9 Neighboring gene MYC binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rhomboid-related protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    106663288..106722352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006077543.3 → XP_006077605.1  rhomboid-related protein 2

    See identical proteins and their annotated locations for XP_006077605.1

    Conserved Domains (1) summary
    pfam01694
    Location:114 → 266
    Rhomboid; Rhomboid family

  2. XM_006077544.3 → XP_006077606.1  rhomboid-related protein 2

    See identical proteins and their annotated locations for XP_006077606.1

    Related
    ENSBALP00030053248.1, ENSBALT00030079576.1
    Conserved Domains (1) summary
    pfam01694
    Location:114 → 266
    Rhomboid; Rhomboid family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.