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UBB ubiquitin B [ Bubalus bubalis (water buffalo) ]

Gene ID: 102399013, updated on 10-Mar-2024

Summary

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Gene symbol
UBB
Gene description
ubiquitin B
See related
EnsemblRapid:ENSBALG00030030287
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (29872900..29874801)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (30086328..30088227)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class L Neighboring gene uncharacterized LOC112583458 Neighboring gene centromere protein V Neighboring gene uncharacterized LOC102413478 Neighboring gene transient receptor potential cation channel subfamily V member 2 Neighboring gene uncharacterized LOC112583712 Neighboring gene small nucleolar RNA SNORD49

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyubiquitin-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    29872900..29874801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006079461.4 → XP_006079523.2  polyubiquitin-B isoform X2

    Related
    ENSBALP00030055698.1, ENSBALT00030083665.1
    Conserved Domains (1) summary
    cd01803
    Location:77 → 152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin

  2. XM_025278987.3 → XP_025134772.2  polyubiquitin-B isoform X1

    Conserved Domains (1) summary
    cd01803
    Location:165 → 240
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
Nucleotide Protein
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