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    hyaB hydrogenase 1 large subunit [ Shigella flexneri 2a str. 301 ]

    Gene ID: 1023947, updated on 18-May-2013
    Gene symbol
    hyaB
    Gene description
    hydrogenase 1 large subunit
    Locus tag
    SF0974
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Shigella flexneri 2a str. 301 (strain: 301, serotype: 2a)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella
    Sequence :
    NC_004337.2 (1021176..1022969)

    NC_004337.2Genomic Context describing neighboring genes Neighboring gene HflBKC-binding inner membrane protein Neighboring gene tRNA Neighboring gene hydrogenase-1 small subunit Neighboring gene hydrogenase 1 b-type cytochrome subunit Neighboring gene hydrogenase 1 maturation protease Neighboring gene hydrogenase-1 operon protein HyaE Neighboring gene Hydrogenase-1 operon protein hyaF

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. Jin Q, et al. Nucleic Acids Res, 2002 Oct 15. PMID 12384590.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    hydrogenase 1 large subunit
    NP_706895.1
    • Code: C; COG: COG0374

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004337.2

      Range
      1021176..1022969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_706895.1 hydrogenase 1 large subunit [Shigella flexneri 2a str. 301]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0ACD9
      Conserved Domains (2) summary
      PRK10170
      Location:1 – 597
      Blast Score: 3329
      PRK10170; hydrogenase 1 large subunit; Provisional
      COG0374
      Location:16 – 597
      Blast Score: 2237
      HyaB; Ni,Fe-hydrogenase I large subunit [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version
    genomic AE005674.2 AAN42602.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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