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USP45 ubiquitin specific peptidase 45 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102393888, updated on 10-Mar-2024

Summary

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Gene symbol
USP45
Gene description
ubiquitin specific peptidase 45
See related
EnsemblRapid:ENSBALG00030034571
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See USP45 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
20
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 10 NC_059166.1 (53904880..53961143, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 10 NC_058352.1 (53034853..53090594, complement)

Chromosome 10 - NC_059166.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q3, methyltransferase Neighboring gene PNN interacting serine and arginine rich protein Neighboring gene thiosulfate sulfurtransferase like domain containing 3 Neighboring gene cyclin C Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059166.1 Reference NDDB_SH_1 Primary Assembly

    Range
    53904880..53961143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025294630.3 → XP_025150415.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X2

    Related
    ENSBALP00030064003.1, ENSBALT00030095834.1
    Conserved Domains (3) summary
    cd02667
    Location:590 → 813
    Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam02148
    Location:80 → 131
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
    cl02553
    Location:191 → 387
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  2. XM_006052446.4 → XP_006052508.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X1

    Related
    ENSBALP00030063974.1, ENSBALT00030095774.1
    Conserved Domains (3) summary
    cd02667
    Location:591 → 814
    Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam02148
    Location:81 → 132
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein

  3. XM_044924337.2 → XP_044780272.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X5

    Related
    ENSBALP00030063989.1, ENSBALT00030095803.1
    Conserved Domains (3) summary
    COG5560
    Location:192 → 692
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    cl09957
    Location:81 → 122
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein

  4. XM_044924336.2 → XP_044780271.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X4

    Conserved Domains (2) summary
    COG5207
    Location:72 → 348
    UBP14; Uncharacterized Zn-finger protein, UBP-type [General function prediction only]
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  5. XM_025294631.3 → XP_025150416.2  ubiquitin carboxyl-terminal hydrolase 45 isoform X3

    Conserved Domains (2) summary
    COG5207
    Location:72 → 348
    UBP14; Uncharacterized Zn-finger protein, UBP-type [General function prediction only]
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  6. XM_025294634.3 → XP_025150419.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X7

    Conserved Domains (2) summary
    pfam02148
    Location:81 → 132
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  7. XM_025294633.3 → XP_025150418.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X6

    Conserved Domains (2) summary
    pfam02148
    Location:81 → 132
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
    cl02553
    Location:192 → 388
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  8. XM_044924338.2 → XP_044780273.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X9

    Conserved Domains (2) summary
    COG5207
    Location:72 → 314
    UBP14; Uncharacterized Zn-finger protein, UBP-type [General function prediction only]
    cl02553
    Location:192 → 308
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  9. XM_025294635.3 → XP_025150420.1  ubiquitin carboxyl-terminal hydrolase 45 isoform X8

    Conserved Domains (2) summary
    pfam02148
    Location:81 → 132
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
    cl02553
    Location:192 → 317
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

RNA

  1. XR_006542386.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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