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ZC2HC1A zinc finger C2HC-type containing 1A [ Bubalus bubalis (water buffalo) ]

Gene ID: 102392807, updated on 10-Mar-2024

Summary

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Gene symbol
ZC2HC1A
Gene description
zinc finger C2HC-type containing 1A
See related
EnsemblRapid:ENSBALG00030031225
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 15 NC_059171.1 (40181529..40235131, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 15 NC_058357.1 (40165874..40219527, complement)

Chromosome 15 - NC_059171.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA61 Neighboring gene uncharacterized LOC102393132 Neighboring gene interleukin 7 Neighboring gene cAMP-dependent protein kinase inhibitor alpha Neighboring gene uncharacterized LOC123329387

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger C2HC domain-containing protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059171.1 Reference NDDB_SH_1 Primary Assembly

    Range
    40181529..40235131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025265207.3 → XP_025120992.3  zinc finger C2HC domain-containing protein 1A isoform X3

    Related
    ENSBALP00030057274.1, ENSBALT00030086142.1
    Conserved Domains (1) summary
    pfam13913
    Location:14 → 38
    zf-C2HC_2; zinc-finger of a C2HC-type

  2. XM_044928663.2 → XP_044784598.2  zinc finger C2HC domain-containing protein 1A isoform X2

    Related
    ENSBALP00030057279.1, ENSBALT00030086147.1

  3. XM_044928662.2 → XP_044784597.2  zinc finger C2HC domain-containing protein 1A isoform X1

Nucleotide Protein
Heading Accession and Version

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