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KDM4D lysine demethylase 4D [ Bubalus bubalis (water buffalo) ]

Gene ID: 102390765, updated on 10-Mar-2024

Summary

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Gene symbol
KDM4D
Gene description
lysine demethylase 4D
See related
EnsemblRapid:ENSBALG00030016006
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 16 NC_059172.1 (70031474..70062896)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 16 NC_058358.1 (69566747..69597856)

Chromosome 16 - NC_059172.1Genomic Context describing neighboring genes Neighboring gene piwi like RNA-mediated gene silencing 4 Neighboring gene angiomotin like 1 Neighboring gene FUN14 domain-containing protein 1-like Neighboring gene lysine-specific demethylase 4D Neighboring gene CWC15 spliceosome associated protein homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K9 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase 4D
Names
lysine (K)-specific demethylase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059172.1 Reference NDDB_SH_1 Primary Assembly

    Range
    70031474..70062896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025266972.3 → XP_025122757.3  lysine-specific demethylase 4D

    Related
    ENSBALP00030029827.1, ENSBALT00030044815.1

  2. XM_025266973.3 → XP_025122758.3  lysine-specific demethylase 4D

    Related
    ENSBALP00030029817.1, ENSBALT00030044805.1

RNA

  1. XR_006640102.1 RNA Sequence

  2. XR_006545423.2 RNA Sequence

  3. XR_006545422.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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