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FBXL6 F-box and leucine rich repeat protein 6 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102388916, updated on 10-Mar-2024

Summary

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Gene symbol
FBXL6
Gene description
F-box and leucine rich repeat protein 6
See related
EnsemblRapid:ENSBALG00030016111
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
fbx16
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 15 NC_059171.1 (81391884..81395211, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 15 NC_058357.1 (81164664..81167991, complement)

Chromosome 15 - NC_059171.1Genomic Context describing neighboring genes Neighboring gene scratch family transcriptional repressor 1 Neighboring gene WAS/WASL-interacting protein family member 2-like Neighboring gene transmembrane protein 249 Neighboring gene solute carrier family 52 member 2 Neighboring gene aarF domain containing kinase 5 Neighboring gene cleavage and polyadenylation specific factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/LRR-repeat protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059171.1 Reference NDDB_SH_1 Primary Assembly

    Range
    81391884..81395211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025265629.2 → XP_025121414.1  F-box/LRR-repeat protein 6 isoform X3

    Conserved Domains (3) summary
    sd00034
    Location:190 → 215
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:107 → 154
    F-box-like
    cl28166
    Location:173 → 365
    AMN1; Antagonist of mitotic exit network protein 1

  2. XM_025265628.2 → XP_025121413.1  F-box/LRR-repeat protein 6 isoform X2

    Conserved Domains (3) summary
    sd00034
    Location:190 → 215
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:107 → 154
    F-box-like
    cl28166
    Location:177 → 380
    AMN1; Antagonist of mitotic exit network protein 1

  3. XM_025265627.2 → XP_025121412.1  F-box/LRR-repeat protein 6 isoform X1

    Related
    ENSBALP00030030042.1, ENSBALT00030045064.1
    Conserved Domains (4) summary
    sd00033
    Location:469 → 493
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:216 → 241
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:107 → 154
    F-box-like
    cl28166
    Location:177 → 392
    AMN1; Antagonist of mitotic exit network protein 1
Nucleotide Protein
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