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ZBTB20 zinc finger and BTB domain containing 20 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102386738, updated on 10-Mar-2024

Summary

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Gene symbol
ZBTB20
Gene description
zinc finger and BTB domain containing 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841947.1 (1177384..1798437, complement)

NW_005841947.1Genomic Context describing neighboring genes Neighboring gene dopamine receptor D3 Neighboring gene T cell immunoreceptor with Ig and ITIM domains Neighboring gene growth associated protein 43 Neighboring gene limbic system associated membrane protein Neighboring gene uncharacterized LOC102387167

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841947 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841947.1 Reference ASM45574v1 Primary Assembly

    Range
    1177384..1798437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025199647.1 → XP_025055432.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  2. XM_025199650.1 → XP_025055435.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  3. XM_025199644.1 → XP_025055429.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  4. XM_025199648.1 → XP_025055433.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  5. XM_025199634.1 → XP_025055419.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  6. XM_025199640.1 → XP_025055425.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  7. XM_025199636.1 → XP_025055421.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  8. XM_025199638.1 → XP_025055423.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  9. XM_025199620.1 → XP_025055405.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  10. XM_025199645.1 → XP_025055430.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  11. XM_025199627.1 → XP_025055412.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  12. XM_025199633.1 → XP_025055418.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  13. XM_025199624.1 → XP_025055409.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  14. XM_025199621.1 → XP_025055406.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  15. XM_025199631.1 → XP_025055416.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  16. XM_025199626.1 → XP_025055411.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  17. XM_025199618.1 → XP_025055403.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  18. XM_025199641.1 → XP_025055426.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  19. XM_025199639.1 → XP_025055424.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  20. XM_025199642.1 → XP_025055427.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  21. XM_025199637.1 → XP_025055422.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  22. XM_025199643.1 → XP_025055428.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  23. XM_025199635.1 → XP_025055420.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  24. XM_025199625.1 → XP_025055410.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  25. XM_025199629.1 → XP_025055414.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  26. XM_025199655.1 → XP_025055440.1  zinc finger and BTB domain-containing protein 20 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GAI0
    Conserved Domains (5) summary
    COG5048
    Location:503 → 574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:507 → 527
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:561 → 583
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:575 → 600
    zf-H2C2_2; Zinc-finger double domain

  27. XM_025199654.1 → XP_025055439.1  zinc finger and BTB domain-containing protein 20 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G6Y3

  28. XM_025199616.1 → XP_025055401.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  29. XM_025199632.1 → XP_025055417.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  30. XM_025199628.1 → XP_025055413.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  31. XM_025199622.1 → XP_025055407.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  32. XM_025199623.1 → XP_025055408.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  33. XM_025199617.1 → XP_025055402.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  34. XM_025199649.1 → XP_025055434.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  35. XM_025199652.1 → XP_025055437.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  36. XM_025199651.1 → XP_025055436.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

  37. XM_025199653.1 → XP_025055438.1  zinc finger and BTB domain-containing protein 20 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G7J5

RNA

  1. XR_003093196.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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