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PDK1 pyruvate dehydrogenase kinase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102384931, updated on 10-Mar-2024

Summary

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Gene symbol
PDK1
Gene description
pyruvate dehydrogenase kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841969.1 (900080..944985)

NW_005841969.1Genomic Context describing neighboring genes Neighboring gene distal-less homeobox 1 Neighboring gene integrin subunit alpha 6 Neighboring gene neurabin-1-like Neighboring gene uncharacterized LOC102385343 Neighboring gene Sp3 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841969 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841969.1 Reference ASM45574v1 Primary Assembly

    Range
    900080..944985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006020795.3 → XP_006020857.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_006020857.1

    UniProtKB/TrEMBL
    A0A1U7RMM9
    Conserved Domains (3) summary
    smart00387
    Location:194 → 314
    HATPase_c; Histidine kinase-like ATPases
    COG0642
    Location:183 → 322
    BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
    pfam10436
    Location:2 → 144
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase

  2. XM_006020796.3 → XP_006020858.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_006020858.1

    UniProtKB/TrEMBL
    A0A1U7RMM9
    Conserved Domains (3) summary
    smart00387
    Location:194 → 314
    HATPase_c; Histidine kinase-like ATPases
    COG0642
    Location:183 → 322
    BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
    pfam10436
    Location:2 → 144
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase

  3. XM_025200487.1 → XP_025056272.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GA06
    Conserved Domains (2) summary
    smart00387
    Location:168 → 288
    HATPase_c; Histidine kinase-like ATPases
    pfam10436
    Location:1 → 144
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase

  4. XM_025200488.1 → XP_025056273.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GDR0
    Conserved Domains (2) summary
    smart00387
    Location:162 → 282
    HATPase_c; Histidine kinase-like ATPases
    pfam10436
    Location:1 → 122
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase

  5. XM_025200486.1 → XP_025056271.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G9F1
    Conserved Domains (2) summary
    smart00387
    Location:175 → 295
    HATPase_c; Histidine kinase-like ATPases
    pfam10436
    Location:19 → 125
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
Nucleotide Protein
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