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TSC1 TSC complex subunit 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102383470, updated on 10-Mar-2024

Summary

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Gene symbol
TSC1
Gene description
TSC complex subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842399.1 (674361..710401)

NW_005842399.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112551261 Neighboring gene growth factor independent 1B transcriptional repressor Neighboring gene sperm acrosome associated 9 Neighboring gene adenylate kinase 8 Neighboring gene general transcription factor IIIC subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842399 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TSC1-TSC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: hamartin
Names
tuberous sclerosis 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842399.1 Reference ASM45574v1 Primary Assembly

    Range
    674361..710401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006029797.3 → XP_006029859.1  LOW QUALITY PROTEIN: hamartin

    UniProtKB/TrEMBL
    A0A1U7SDG4
    Conserved Domains (3) summary
    pfam04388
    Location:7 → 723
    Hamartin; Hamartin protein
    pfam12718
    Location:756 → 919
    Tropomyosin_1; Tropomyosin like
    cl02488
    Location:734 → 933
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
Nucleotide Protein
Heading Accession and Version

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